RustFungiGenomicsV1, Main, Exploration, bibRecord, 000438

Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.

Identifieur interne : 000438 ( Main/Exploration ); précédent : 000437; suivant : 000439

Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.

Source :

BMC plant biology [ 1471-2229 ] ; 2015.

RBID : pubmed:26444258

Descripteurs français

English descriptors

KwdEn :
- Amino Acid Sequence (MeSH), Carrier Proteins (chemistry), Carrier Proteins (genetics), Carrier Proteins (metabolism), Chlorophyll (metabolism), Chromosome Segregation (MeSH), Cloning, Molecular (MeSH), Disease Resistance (MeSH), Expressed Sequence Tags (MeSH), Fluorescence (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Genetic Linkage (MeSH), Genotype (MeSH), Molecular Sequence Data (MeSH), Photosynthesis (MeSH), Photosystem II Protein Complex (metabolism), Phylogeny (MeSH), Physical Chromosome Mapping (MeSH), Plant Diseases (microbiology), Plant Leaves (physiology), Plant Proteins (chemistry), Plant Proteins (genetics), Plant Proteins (metabolism), Polymerase Chain Reaction (MeSH), Polymorphism, Genetic (MeSH), Pseudomonas syringae (physiology), Real-Time Polymerase Chain Reaction (MeSH), Seedlings (microbiology), Triticum (genetics), Triticum (immunology), Triticum (microbiology).
MESH :
- chemical , chemistry : Carrier Proteins, Plant Proteins.
- chemical , genetics : Carrier Proteins, Plant Proteins.
- chemical , metabolism : Carrier Proteins, Chlorophyll, Photosystem II Protein Complex, Plant Proteins.
- genetics : Triticum.
- immunology : Triticum.
- microbiology : Plant Diseases, Seedlings, Triticum.
- physiology : Plant Leaves, Pseudomonas syringae.
- Amino Acid Sequence, Chromosome Segregation, Cloning, Molecular, Disease Resistance, Expressed Sequence Tags, Fluorescence, Gene Expression Regulation, Plant, Genes, Plant, Genetic Linkage, Genotype, Molecular Sequence Data, Photosynthesis, Phylogeny, Physical Chromosome Mapping, Polymerase Chain Reaction, Polymorphism, Genetic, Real-Time Polymerase Chain Reaction.

Abstract

BACKGROUND

Stripe rust, a highly destructive foliar disease of wheat (Triticum aestivum), causes severe losses, which may be accompanied by reduced photosynthetic activity and accelerated leaf senescence.

METHODS

We used suppression subtractive hybridization (SSH) to examine the mechanisms of resistance in the resistant wheat line L693 (Reg. No. GP-972, PI 672538), which was derived from a lineage that includes a wide cross between common and Thinopyrum intermedium. Sequencing of an SSH cDNA library identified 112 expressed sequence tags.

RESULTS

In silico mapping placed one of these tags [GenBank: JK972238] on chromosome 1A. Primers based on [GenBank: JK972238] amplified a polymorphic band, which co-segregated with YrL693. We cloned a candidate gene encoding wheat copper-binding protein (WCBP1) by amplifying the polymorphic region, and we mapped WCBP1 to a 0.64 cM genetic interval. Brachypodium, rice, and sorghum have genes and genomic regions syntenic to this region.

DISCUSSION

Sequence analysis suggested that the resistant WCBP1 allele might have resulted from a deletion of 36-bp sequence of the wheat genomic sequence, rather than direct transfer from Th. intermedium. qRT-PCR confirmed that WCBP1 expression changes in response to pathogen infection.

CONCLUSIONS

The unique chromosomal location and expression mode of WCBP1 suggested that WCBP1 is the putative candidate gene of YrL693, which was involved in leaf senescence and photosynthesis related to plant responses to stripe rust infection during the grain-filling stage.

DOI: 10.1186/s12870-015-0612-4
PubMed: 26444258
PubMed Central: PMC4595213

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000440
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Le document en format XML

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<author><name sortKey="Ren, Zhenglong" sort="Ren, Zhenglong" uniqKey="Ren Z" first="Zhenglong" last="Ren">Zhenglong Ren</name>
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<author><name sortKey="Luo, Peigao" sort="Luo, Peigao" uniqKey="Luo P" first="Peigao" last="Luo">Peigao Luo</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.</title>
<author><name sortKey="Li, Xin" sort="Li, Xin" uniqKey="Li X" first="Xin" last="Li">Xin Li</name>
<affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. sadoneli@gmail.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193</wicri:regionArea>
<wicri:noRegion>100193</wicri:noRegion>
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<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. sadoneli@gmail.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
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<author><name sortKey="Liu, Taiguo" sort="Liu, Taiguo" uniqKey="Liu T" first="Taiguo" last="Liu">Taiguo Liu</name>
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<country xml:lang="fr">République populaire de Chine</country>
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<wicri:noRegion>100193</wicri:noRegion>
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<author><name sortKey="Chen, Wanquan" sort="Chen, Wanquan" uniqKey="Chen W" first="Wanquan" last="Chen">Wanquan Chen</name>
<affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. wqchen112@ippcaas.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193</wicri:regionArea>
<wicri:noRegion>100193</wicri:noRegion>
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<author><name sortKey="Zhong, Shengfu" sort="Zhong, Shengfu" uniqKey="Zhong S" first="Shengfu" last="Zhong">Shengfu Zhong</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 18481012@qq.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
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<author><name sortKey="Zhang, Huaiyu" sort="Zhang, Huaiyu" uniqKey="Zhang H" first="Huaiyu" last="Zhang">Huaiyu Zhang</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. zhyu@sicau.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
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<author><name sortKey="Tang, Zongxiang" sort="Tang, Zongxiang" uniqKey="Tang Z" first="Zongxiang" last="Tang">Zongxiang Tang</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. zxtang@sicau.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Chang, Zhijian" sort="Chang, Zhijian" uniqKey="Chang Z" first="Zhijian" last="Chang">Zhijian Chang</name>
<affiliation wicri:level="1"><nlm:affiliation>Institute of Crop Genetics, Shanxi Academy of Agricultural Science, Taiyuan, Shanxi, 030031, China. wrczj@126.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Institute of Crop Genetics, Shanxi Academy of Agricultural Science, Taiyuan, Shanxi, 030031</wicri:regionArea>
<wicri:noRegion>030031</wicri:noRegion>
</affiliation>
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<author><name sortKey="Wang, Ling" sort="Wang, Ling" uniqKey="Wang L" first="Ling" last="Wang">Ling Wang</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 731022275@qq.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Zhang, Min" sort="Zhang, Min" uniqKey="Zhang M" first="Min" last="Zhang">Min Zhang</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 691020460@qq.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Li, Liqin" sort="Li, Liqin" uniqKey="Li L" first="Liqin" last="Li">Liqin Li</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lilq88@qq.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Rao, Hefei" sort="Rao, Hefei" uniqKey="Rao H" first="Hefei" last="Rao">Hefei Rao</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 654786574@qq.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Ren, Zhenglong" sort="Ren, Zhenglong" uniqKey="Ren Z" first="Zhenglong" last="Ren">Zhenglong Ren</name>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lpg052000@aliyun.com.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Luo, Peigao" sort="Luo, Peigao" uniqKey="Luo P" first="Peigao" last="Luo">Peigao Luo</name>
<affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. lpglab@sicau.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193</wicri:regionArea>
<wicri:noRegion>100193</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lpglab@sicau.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130</wicri:regionArea>
<wicri:noRegion>611130</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j">BMC plant biology</title>
<idno type="eISSN">1471-2229</idno>
<imprint><date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence (MeSH)</term>
<term>Carrier Proteins (chemistry)</term>
<term>Carrier Proteins (genetics)</term>
<term>Carrier Proteins (metabolism)</term>
<term>Chlorophyll (metabolism)</term>
<term>Chromosome Segregation (MeSH)</term>
<term>Cloning, Molecular (MeSH)</term>
<term>Disease Resistance (MeSH)</term>
<term>Expressed Sequence Tags (MeSH)</term>
<term>Fluorescence (MeSH)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Genes, Plant (MeSH)</term>
<term>Genetic Linkage (MeSH)</term>
<term>Genotype (MeSH)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Photosynthesis (MeSH)</term>
<term>Photosystem II Protein Complex (metabolism)</term>
<term>Phylogeny (MeSH)</term>
<term>Physical Chromosome Mapping (MeSH)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Leaves (physiology)</term>
<term>Plant Proteins (chemistry)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
<term>Polymerase Chain Reaction (MeSH)</term>
<term>Polymorphism, Genetic (MeSH)</term>
<term>Pseudomonas syringae (physiology)</term>
<term>Real-Time Polymerase Chain Reaction (MeSH)</term>
<term>Seedlings (microbiology)</term>
<term>Triticum (genetics)</term>
<term>Triticum (immunology)</term>
<term>Triticum (microbiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Cartographie physique de chromosome (MeSH)</term>
<term>Chlorophylle (métabolisme)</term>
<term>Clonage moléculaire (MeSH)</term>
<term>Complexe protéique du photosystème II (métabolisme)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Feuilles de plante (physiologie)</term>
<term>Fluorescence (MeSH)</term>
<term>Gènes de plante (MeSH)</term>
<term>Génotype (MeSH)</term>
<term>Liaison génétique (MeSH)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Photosynthèse (MeSH)</term>
<term>Phylogenèse (MeSH)</term>
<term>Plant (microbiologie)</term>
<term>Polymorphisme génétique (MeSH)</term>
<term>Protéines de transport (composition chimique)</term>
<term>Protéines de transport (génétique)</term>
<term>Protéines de transport (métabolisme)</term>
<term>Protéines végétales (composition chimique)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Pseudomonas syringae (physiologie)</term>
<term>Réaction de polymérisation en chaine en temps réel (MeSH)</term>
<term>Réaction de polymérisation en chaîne (MeSH)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Résistance à la maladie (MeSH)</term>
<term>Ségrégation des chromosomes (MeSH)</term>
<term>Séquence d'acides aminés (MeSH)</term>
<term>Triticum (génétique)</term>
<term>Triticum (immunologie)</term>
<term>Triticum (microbiologie)</term>
<term>Étiquettes de séquences exprimées (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Carrier Proteins</term>
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Carrier Proteins</term>
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Carrier Proteins</term>
<term>Chlorophyll</term>
<term>Photosystem II Protein Complex</term>
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Protéines de transport</term>
<term>Protéines végétales</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Protéines de transport</term>
<term>Protéines végétales</term>
<term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="immunologie" xml:lang="fr"><term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term>
<term>Plant</term>
<term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term>
<term>Seedlings</term>
<term>Triticum</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Chlorophylle</term>
<term>Complexe protéique du photosystème II</term>
<term>Protéines de transport</term>
<term>Protéines végétales</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Feuilles de plante</term>
<term>Pseudomonas syringae</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Plant Leaves</term>
<term>Pseudomonas syringae</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term>
<term>Chromosome Segregation</term>
<term>Cloning, Molecular</term>
<term>Disease Resistance</term>
<term>Expressed Sequence Tags</term>
<term>Fluorescence</term>
<term>Gene Expression Regulation, Plant</term>
<term>Genes, Plant</term>
<term>Genetic Linkage</term>
<term>Genotype</term>
<term>Molecular Sequence Data</term>
<term>Photosynthesis</term>
<term>Phylogeny</term>
<term>Physical Chromosome Mapping</term>
<term>Polymerase Chain Reaction</term>
<term>Polymorphism, Genetic</term>
<term>Real-Time Polymerase Chain Reaction</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Cartographie physique de chromosome</term>
<term>Clonage moléculaire</term>
<term>Données de séquences moléculaires</term>
<term>Fluorescence</term>
<term>Gènes de plante</term>
<term>Génotype</term>
<term>Liaison génétique</term>
<term>Photosynthèse</term>
<term>Phylogenèse</term>
<term>Polymorphisme génétique</term>
<term>Réaction de polymérisation en chaine en temps réel</term>
<term>Réaction de polymérisation en chaîne</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Résistance à la maladie</term>
<term>Ségrégation des chromosomes</term>
<term>Séquence d'acides aminés</term>
<term>Étiquettes de séquences exprimées</term>
</keywords>
</textClass>
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</teiHeader>
<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
</p>
<p>Stripe rust, a highly destructive foliar disease of wheat (Triticum aestivum), causes severe losses, which may be accompanied by reduced photosynthetic activity and accelerated leaf senescence.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>METHODS</b>
</p>
<p>We used suppression subtractive hybridization (SSH) to examine the mechanisms of resistance in the resistant wheat line L693 (Reg. No. GP-972, PI 672538), which was derived from a lineage that includes a wide cross between common and Thinopyrum intermedium. Sequencing of an SSH cDNA library identified 112 expressed sequence tags.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>RESULTS</b>
</p>
<p>In silico mapping placed one of these tags [GenBank: JK972238] on chromosome 1A. Primers based on [GenBank: JK972238] amplified a polymorphic band, which co-segregated with YrL693. We cloned a candidate gene encoding wheat copper-binding protein (WCBP1) by amplifying the polymorphic region, and we mapped WCBP1 to a 0.64 cM genetic interval. Brachypodium, rice, and sorghum have genes and genomic regions syntenic to this region.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>DISCUSSION</b>
</p>
<p>Sequence analysis suggested that the resistant WCBP1 allele might have resulted from a deletion of 36-bp sequence of the wheat genomic sequence, rather than direct transfer from Th. intermedium. qRT-PCR confirmed that WCBP1 expression changes in response to pathogen infection.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b>
</p>
<p>The unique chromosomal location and expression mode of WCBP1 suggested that WCBP1 is the putative candidate gene of YrL693, which was involved in leaf senescence and photosynthesis related to plant responses to stripe rust infection during the grain-filling stage.</p>
</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26444258</PMID>
<DateCompleted><Year>2016</Year>
<Month>07</Month>
<Day>06</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>01</Month>
<Day>08</Day>
</DateRevised>
<Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2229</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>15</Volume>
<PubDate><Year>2015</Year>
<Month>Oct</Month>
<Day>06</Day>
</PubDate>
</JournalIssue>
<Title>BMC plant biology</Title>
<ISOAbbreviation>BMC Plant Biol</ISOAbbreviation>
</Journal>
<ArticleTitle>Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.</ArticleTitle>
<Pagination><MedlinePgn>239</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1186/s12870-015-0612-4</ELocationID>
<Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Stripe rust, a highly destructive foliar disease of wheat (Triticum aestivum), causes severe losses, which may be accompanied by reduced photosynthetic activity and accelerated leaf senescence.</AbstractText>
<AbstractText Label="METHODS" NlmCategory="METHODS">We used suppression subtractive hybridization (SSH) to examine the mechanisms of resistance in the resistant wheat line L693 (Reg. No. GP-972, PI 672538), which was derived from a lineage that includes a wide cross between common and Thinopyrum intermedium. Sequencing of an SSH cDNA library identified 112 expressed sequence tags.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">In silico mapping placed one of these tags [GenBank: JK972238] on chromosome 1A. Primers based on [GenBank: JK972238] amplified a polymorphic band, which co-segregated with YrL693. We cloned a candidate gene encoding wheat copper-binding protein (WCBP1) by amplifying the polymorphic region, and we mapped WCBP1 to a 0.64 cM genetic interval. Brachypodium, rice, and sorghum have genes and genomic regions syntenic to this region.</AbstractText>
<AbstractText Label="DISCUSSION" NlmCategory="CONCLUSIONS">Sequence analysis suggested that the resistant WCBP1 allele might have resulted from a deletion of 36-bp sequence of the wheat genomic sequence, rather than direct transfer from Th. intermedium. qRT-PCR confirmed that WCBP1 expression changes in response to pathogen infection.</AbstractText>
<AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">The unique chromosomal location and expression mode of WCBP1 suggested that WCBP1 is the putative candidate gene of YrL693, which was involved in leaf senescence and photosynthesis related to plant responses to stripe rust infection during the grain-filling stage.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Li</LastName>
<ForeName>Xin</ForeName>
<Initials>X</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. sadoneli@gmail.com.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. sadoneli@gmail.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Liu</LastName>
<ForeName>Taiguo</ForeName>
<Initials>T</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. tgliu@ippcaas.cn.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chen</LastName>
<ForeName>Wanquan</ForeName>
<Initials>W</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. wqchen112@ippcaas.cn.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhong</LastName>
<ForeName>Shengfu</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 18481012@qq.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Huaiyu</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. zhyu@sicau.edu.cn.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tang</LastName>
<ForeName>Zongxiang</ForeName>
<Initials>Z</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. zxtang@sicau.edu.cn.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chang</LastName>
<ForeName>Zhijian</ForeName>
<Initials>Z</Initials>
<AffiliationInfo><Affiliation>Institute of Crop Genetics, Shanxi Academy of Agricultural Science, Taiyuan, Shanxi, 030031, China. wrczj@126.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Wang</LastName>
<ForeName>Ling</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 731022275@qq.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zhang</LastName>
<ForeName>Min</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 691020460@qq.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Li</LastName>
<ForeName>Liqin</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lilq88@qq.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Rao</LastName>
<ForeName>Hefei</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. 654786574@qq.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ren</LastName>
<ForeName>Zhenglong</ForeName>
<Initials>Z</Initials>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lpg052000@aliyun.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Luo</LastName>
<ForeName>Peigao</ForeName>
<Initials>P</Initials>
<AffiliationInfo><Affiliation>State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100193, China. lpglab@sicau.edu.cn.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China. lpglab@sicau.edu.cn.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName>
<AccessionNumberList><AccessionNumber>JK972179</AccessionNumber>
<AccessionNumber>JK972287</AccessionNumber>
<AccessionNumber>JK974072</AccessionNumber>
<AccessionNumber>JK974074</AccessionNumber>
</AccessionNumberList>
</DataBank>
</DataBankList>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2015</Year>
<Month>10</Month>
<Day>06</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>BMC Plant Biol</MedlineTA>
<NlmUniqueID>100967807</NlmUniqueID>
<ISSNLinking>1471-2229</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D002352">Carrier Proteins</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D045332">Photosystem II Protein Complex</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="C023548">copper-binding protein</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>1406-65-1</RegistryNumber>
<NameOfSubstance UI="D002734">Chlorophyll</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002352" MajorTopicYN="N">Carrier Proteins</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002734" MajorTopicYN="N">Chlorophyll</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020090" MajorTopicYN="N">Chromosome Segregation</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D003001" MajorTopicYN="N">Cloning, Molecular</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D060467" MajorTopicYN="Y">Disease Resistance</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020224" MajorTopicYN="N">Expressed Sequence Tags</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005453" MajorTopicYN="N">Fluorescence</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008040" MajorTopicYN="N">Genetic Linkage</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010788" MajorTopicYN="N">Photosynthesis</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D045332" MajorTopicYN="N">Photosystem II Protein Complex</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020161" MajorTopicYN="N">Physical Chromosome Mapping</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016133" MajorTopicYN="N">Polymerase Chain Reaction</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D011110" MajorTopicYN="N">Polymorphism, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D044224" MajorTopicYN="N">Pseudomonas syringae</DescriptorName>
<QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D060888" MajorTopicYN="N">Real-Time Polymerase Chain Reaction</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D036226" MajorTopicYN="N">Seedlings</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014908" MajorTopicYN="N">Triticum</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000276" MajorTopicYN="Y">immunology</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
</MeshHeadingList>
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<Month>05</Month>
<Day>11</Day>
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<PubMedPubDate PubStatus="accepted"><Year>2015</Year>
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<name sortKey="Chang, Zhijian" sort="Chang, Zhijian" uniqKey="Chang Z" first="Zhijian" last="Chang">Zhijian Chang</name>
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Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.

Wheat WCBP1 encodes a putative copper-binding protein involved in stripe rust resistance and inhibition of leaf senescence.

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